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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
UVM rs112151899 chr20:30297204 G/A 0.000118 67 27.92 8.18 7.6 KM Plot
UVM rs112183790 chr20:30247771 T/C 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs112187236 chr20:30377833 A/T 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs11246932 chr12:132610313 T/G 5.06E-7 65 31.55 23.63 0.73 KM Plot
UVM rs11246933 chr12:132610314 G/A 6.95E-7 65 27.9 23.87 0.73 KM Plot
UVM rs11246938 chr12:132623186 C/T 4.29E-7 67 27.92 24.87 0.73 KM Plot
UVM rs11246939 chr12:132623225 C/T 5.35E-7 66 27.92 23.87 0.73 KM Plot
UVM rs11246940 chr12:132623473 A/G 4.29E-7 67 27.92 24.87 0.73 KM Plot
UVM rs112516875 chr20:30408903 C/CA 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs112754271 chr20:30376136 G/T 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs112772945 chr20:30355173 CTTTTTCTTT/C 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs11287205 chr15:40848072 TC/T 0.000214 67 27.88 24.87 16.78 KM Plot
UVM rs112918456 chr1:114736437 C/T 0.000143 64 31.55 21.27 7.6 KM Plot
UVM rs113032742 chr20:30237333 C/T 6.07E-5 67 27.9 14.23 7.6 KM Plot
UVM rs113074967 chr20:30285804 C/T 6.07E-5 67 27.9 14.23 7.6 KM Plot